STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_4315Duf862 domain containing protein. (263 aa)    
Predicted Functional Partners:
CMQ_1256
26S proteasome regulatory subunit s5a.
    
   0.726
CMQ_6758
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
    
   0.719
CMQ_501
Proteasome subunit alpha type.
    
   0.719
CMQ_2799
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
    
   0.719
CMQ_3162
Proteasome subunit beta.
    
   0.719
CMQ_5882
Proteasome subunit alpha type.
    
   0.719
CMQ_5043
Proteasome regulatory particle subunit.
    
   0.719
CMQ_8185
Proteasome regulatory particle subunit; Belongs to the AAA ATPase family.
    
   0.719
CMQ_6317
Proteasome subunit alpha type.
    
   0.719
CMQ_1872
Proteasome regulatory particle subunit.
    
   0.719
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.