STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH09659.1PFAM: Amidohydrolase 1; KEGG: fra:Francci3_2992 amidohydrolase. (463 aa)    
Predicted Functional Partners:
AEH10358.1
PFAM: Amidohydrolase 1; KEGG: rop:ROP_32990 putative hydrolase.
  
     0.743
AEH08712.1
Agmatinase; TIGRFAM: Putative agmatinase; KEGG: fre:Franean1_5671 putative agmatinase; PFAM: Ureohydrolase; Belongs to the arginase family.
  
 
 0.511
AEH11147.1
Agmatinase; KEGG: hch:HCH_03622 arginase; PFAM: Ureohydrolase; Belongs to the arginase family.
  
 
 0.511
AEH08710.1
S-adenosylhomocysteine deaminase; KEGG: fri:FraEuI1c_5874 amidohydrolase; PFAM: Amidohydrolase 1.
  
 
 0.402
Your Current Organism:
Frankia symbiont
NCBI taxonomy Id: 656024
Other names: F. symbiont of Datisca glomerata, Frankia symbiont of Datisca glomerata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.