STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ91029.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily. (399 aa)    
Predicted Functional Partners:
SEQ91055.1
Multiple sugar transport system permease protein.
 
 0.989
SEQ91079.1
Multiple sugar transport system permease protein.
 0.987
SEQ60479.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
 0.951
SEQ82826.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.949
SEQ60507.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.946
SEQ91013.1
Multiple sugar transport system substrate-binding protein.
 0.938
SEQ82796.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 0.936
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.924
SEQ82732.1
Sn-glycerol 3-phosphate transport system permease protein.
 
 0.924
SEQ45878.1
Putative ABC transport system permease protein.
 
      0.898
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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