STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT12174Caspase-7; Belongs to the peptidase C14A family. (406 aa)    
Predicted Functional Partners:
KP79_PYT13826
Centromere protein N.
   
 0.646
KP79_PYT20701
Centromere protein I.
   
 0.625
KP79_PYT16587
Centromere protein M.
   
 0.609
KP79_PYT12030
Centromere protein P.
   
 0.600
KP79_PYT23642
Centromere protein O.
    
 0.570
KP79_PYT09200
Centromere protein K.
   
 0.569
KP79_PYT21851
Caspase-2; Belongs to the peptidase C14A family.
  
 
0.556
KP79_PYT17282
Telomerase protein component 1.
    
 0.526
KP79_PYT17455
Centromere protein S.
   
 0.513
KP79_PYT19618
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 0.501
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.