STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT12728AF4/FMR2 family member 4. (1409 aa)    
Predicted Functional Partners:
KP79_PYT14883
RNA polymerase II elongation factor ELL.
   
 0.954
KP79_PYT03905
Cyclin-T1; Belongs to the cyclin family.
   
 0.922
KP79_PYT03039
Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
    
 0.910
KP79_PYT04813
Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
    
 0.910
KP79_PYT14785
Protein ENL.
    
 0.884
KP79_PYT19435
ELL-associated factor 1.
    
 0.881
KP79_PYT08009
Transcription elongation factor S-II.
    
  0.749
KP79_PYT20333
Protein IWS1-like.
     
 0.744
KP79_PYT10277
Protein unc-79-like.
    
 0.741
KP79_PYT06570
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
   
 
 0.728
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.