STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT09870RNA-binding protein PNO1. (250 aa)    
Predicted Functional Partners:
KP79_PYT23670
Bystin.
   
 0.958
KP79_PYT10880
Pre-rRNA-processing protein TSR1-like.
   
 0.941
KP79_PYT14306
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.939
KP79_PYT15283
Serine/threonine-protein kinase RIO2.
   
 0.926
KP79_PYT08137
Protein LTV1-like.
   
 0.925
KP79_PYT09651
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.918
KP79_PYT05674
Transducin beta-like protein 3.
 
 
 
 0.917
KP79_PYT04555
U3 small nucleolar ribonucleoprotein IMP3.
   
 0.893
KP79_PYT18160
Protein AATF.
   
 
 0.891
KP79_PYT06049
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 0.880
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.