STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT17433Heparanase. (529 aa)    
Predicted Functional Partners:
KP79_PYT23800
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.562
KP79_PYT20688
Glypican-6; Belongs to the glypican family.
     
 0.530
KP79_PYT20852
Glypican-5; Belongs to the glypican family.
     
 0.524
KP79_PYT05455
Hepatocyte growth factor-regulated tyrosine kinase substrate.
      
 0.497
KP79_PYT21409
Basement membrane-specific heparan sulfate proteoglycan core protein.
     
 0.416
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.