STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT06242Leucine-rich repeat-containing protein 45. (668 aa)    
Predicted Functional Partners:
KP79_PYT21213
Rootletin.
      
 0.697
KP79_PYT01400
Centlein.
      
 0.658
KP79_PYT22000
Ankyrin repeat and SAM domain-containing protein 3.
   
    0.592
KP79_PYT04457
WD repeat-containing protein 37.
      
 0.570
KP79_PYT12861
Uncharacterized protein.
      
 0.552
KP79_PYT13059
Sodium channel and clathrin linker 1.
    
 
 0.550
KP79_PYT13952
Centrosomal protein of 89 kDa.
     
 0.537
KP79_PYT12334
C2 domain-containing protein 3.
     
 0.418
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.