STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT08866Ubiquitin carboxyl-terminal hydrolase 24. (96 aa)    
Predicted Functional Partners:
KP79_PYT06025
AN1-type zinc finger protein 4.
    
 0.909
KP79_PYT21124
DNA damage-binding protein 2.
    
 0.851
KP79_PYT20483
E3 ubiquitin-protein ligase TRIP12.
   
 
 0.727
KP79_PYT22635
Mothers against decapentaplegic homolog.
   
 0.669
KP79_PYT18862
WD repeat-containing protein 76.
    
 0.645
KP79_PYT21398
Peroxisomal targeting signal 1 receptor.
    
 0.612
KP79_PYT10252
Neuroendocrine convertase 2; Belongs to the peptidase S8 family.
      
 0.564
KP79_PYT11826
Protein cereblon.
      
 0.560
KP79_PYT06651
Intersectin-1.
   
 
  0.529
KP79_PYT21242
Intersectin-1.
   
 
  0.529
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.