STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGN46370.1Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (319 aa)    
Predicted Functional Partners:
EGN43485.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.941
EGN32853.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.935
EGN34133.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.933
EGN35660.1
Hydroxypyruvate reductase.
 
 
 0.924
EGN41755.1
HAD hydrolase, family IA.
    
  0.913
EGN35661.1
2-hydroxy-3-oxopropionate reductase.
 
  
 0.826
EGN32855.1
2-hydroxy-3-oxopropionate reductase.
 
  
 0.825
EGN41709.1
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
    
  0.809
EGN30762.1
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
    
  0.809
EGN35649.1
Phosphoglycolate phosphatase.
    
  0.805
Your Current Organism:
Lachnospiraceae bacterium 3157FAACT1
NCBI taxonomy Id: 658086
Other names: L. bacterium 3_1_57FAA_CT1, Lachnospiraceae bacterium 3_1_57FAA_CT1
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