STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRG83844.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (776 aa)    
Predicted Functional Partners:
KRG81732.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.717
KRG86577.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.712
KRG86578.1
Iron-regulated membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
KRG88310.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.660
KRG87802.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.659
KRG83843.1
Phytase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.633
KRG83526.1
Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.619
KRG86093.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.575
KRG84153.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
KRG87746.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.556
Your Current Organism:
Stenotrophomonas daejeonensis
NCBI taxonomy Id: 659018
Other names: JCM 16244, KCTC 22451, S. daejeonensis, Stenotrophomonas daejeonensis Lee et al. 2011, Stenotrophomonas sp. MJ03, strain MJ03
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.