STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LLO_1838Putative conjugative transfer protein TraN; Equals llo1838. (566 aa)    
Predicted Functional Partners:
msrA
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.969
traH
TraH pilus assembly protein; Equals llo1835.
 
     0.950
LLO_1837
Putative conjugative transfer protein TraF; Equals llo1837.
     0.950
LLO_1836
Putative conjugative transfer protein; Equals llo1836.
 
     0.949
traG
Mating contact stabilization protein TraG; Equals llo1834.
 
     0.946
traW
Type-F conjugative transfer system protein; Equals llo1841.
 
     0.946
LLO_1845
Putative conjugative transfer protein TraB; Equals llo1845.
 
     0.946
LLO_1840
Putative conjugative transfer protein TraU; Equals llo1840.
 
     0.945
traC
F pilus assembly protein TraC; Equals llo1843.
 
     0.945
traE
Type IV conjugative transfer system protein TraE; Equals llo1847.
 
     0.940
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.