Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LLO_1838 | LLO_1840 | LLO_1838 | LLO_1840 | Putative conjugative transfer protein TraN; Equals llo1838. | Putative conjugative transfer protein TraU; Equals llo1840. | 0.945 |
LLO_1838 | LLO_1844 | LLO_1838 | LLO_1844 | Putative conjugative transfer protein TraN; Equals llo1838. | Putative conjugative transfer protein; Equals llo1844. | 0.772 |
LLO_1838 | LLO_1845 | LLO_1838 | LLO_1845 | Putative conjugative transfer protein TraN; Equals llo1838. | Putative conjugative transfer protein TraB; Equals llo1845. | 0.946 |
LLO_1838 | LLO_1846 | LLO_1838 | LLO_1846 | Putative conjugative transfer protein TraN; Equals llo1838. | Putative conjugative transfer protein TraK; Equals llo1846. | 0.768 |
LLO_1838 | LLO_1849 | LLO_1838 | LLO_1849 | Putative conjugative transfer protein TraN; Equals llo1838. | Hypothetical protein; Equals llo1849. | 0.766 |
LLO_1838 | traC | LLO_1838 | LLO_1843 | Putative conjugative transfer protein TraN; Equals llo1838. | F pilus assembly protein TraC; Equals llo1843. | 0.945 |
LLO_1838 | traE | LLO_1838 | LLO_1847 | Putative conjugative transfer protein TraN; Equals llo1838. | Type IV conjugative transfer system protein TraE; Equals llo1847. | 0.940 |
LLO_1838 | traL | LLO_1838 | LLO_1848 | Putative conjugative transfer protein TraN; Equals llo1838. | Type IV conjugative transfer system protein TraL, proteobacteria; Equals llo1848. | 0.772 |
LLO_1838 | traW | LLO_1838 | LLO_1841 | Putative conjugative transfer protein TraN; Equals llo1838. | Type-F conjugative transfer system protein; Equals llo1841. | 0.946 |
LLO_1838 | trbI | LLO_1838 | LLO_1842 | Putative conjugative transfer protein TraN; Equals llo1838. | F pilus extension/retraction protein TrbI Inner membrane protein; Equals llo1842. | 0.772 |
LLO_1840 | LLO_1838 | LLO_1840 | LLO_1838 | Putative conjugative transfer protein TraU; Equals llo1840. | Putative conjugative transfer protein TraN; Equals llo1838. | 0.945 |
LLO_1840 | LLO_1844 | LLO_1840 | LLO_1844 | Putative conjugative transfer protein TraU; Equals llo1840. | Putative conjugative transfer protein; Equals llo1844. | 0.796 |
LLO_1840 | LLO_1845 | LLO_1840 | LLO_1845 | Putative conjugative transfer protein TraU; Equals llo1840. | Putative conjugative transfer protein TraB; Equals llo1845. | 0.952 |
LLO_1840 | LLO_1846 | LLO_1840 | LLO_1846 | Putative conjugative transfer protein TraU; Equals llo1840. | Putative conjugative transfer protein TraK; Equals llo1846. | 0.796 |
LLO_1840 | LLO_1849 | LLO_1840 | LLO_1849 | Putative conjugative transfer protein TraU; Equals llo1840. | Hypothetical protein; Equals llo1849. | 0.788 |
LLO_1840 | traC | LLO_1840 | LLO_1843 | Putative conjugative transfer protein TraU; Equals llo1840. | F pilus assembly protein TraC; Equals llo1843. | 0.953 |
LLO_1840 | traE | LLO_1840 | LLO_1847 | Putative conjugative transfer protein TraU; Equals llo1840. | Type IV conjugative transfer system protein TraE; Equals llo1847. | 0.942 |
LLO_1840 | traL | LLO_1840 | LLO_1848 | Putative conjugative transfer protein TraU; Equals llo1840. | Type IV conjugative transfer system protein TraL, proteobacteria; Equals llo1848. | 0.796 |
LLO_1840 | traW | LLO_1840 | LLO_1841 | Putative conjugative transfer protein TraU; Equals llo1840. | Type-F conjugative transfer system protein; Equals llo1841. | 0.951 |
LLO_1840 | trbI | LLO_1840 | LLO_1842 | Putative conjugative transfer protein TraU; Equals llo1840. | F pilus extension/retraction protein TrbI Inner membrane protein; Equals llo1842. | 0.796 |
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