STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gadBGlutamate decarboxylase B, PLP-dependent; Equals llo2994; Belongs to the group II decarboxylase family. (464 aa)    
Predicted Functional Partners:
glsA
Equals llo3142; similar to glutaminase; Belongs to the glutaminase family.
  
 
 0.933
panC
Putative pantothenate synthetases; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.929
LLO_2358
Putative D-3-phosphoglycerate dehydrogenase (N-terminal part); Equals llo2357a.
  
  
  0.913
LLO_0410
Equals llo0410; similar to Gamma-glutamyltranspeptidase.
     
 0.911
LLO_2332
Equals llo2332; similar to aldehyde dehydrogenase.
   
 0.911
ywdH
Putative aldehyde dehydrogenase ywdH; Equals llo2488; Belongs to the aldehyde dehydrogenase family.
   
 0.911
LLO_1111
Equals llo1111; similar to glutamine synthase; Belongs to the glutamine synthetase family.
    
 0.907
glnA
Glutamine synthetase; Equals llo1450; Belongs to the glutamine synthetase family.
    
 0.907
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.905
panD
Putative aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.903
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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