STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LLO_3170Hypothetical protein, SMP-30/Gluconolaconase/LRE-like region; Equals llo3170. (280 aa)    
Predicted Functional Partners:
LLO_2230
Hypothetical protein; Equals llo2230.
  
  
 
0.916
galU-2
Glucose-1-phosphate uridylyltransferase; Equals llo3171.
  
  
 0.520
galE-3
UDP-galactose-4-epimerase; Equals llo3172; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.512
LLO_0171
Putative oxidoreductase; Equals llo0171.
 
  
 0.498
rplQ
50S ribosomal protein L17; Equals llo0511.
 
      0.436
fcl
Bifunctional GDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
     
 0.436
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.