node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dbpA | hrpB | LLO_3238 | LLO_0029 | Equals llo3238; similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Helicase; Equals llo0029. | 0.722 |
dbpA | pnp | LLO_3238 | LLO_0297 | Equals llo3238; similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Polynucleotide phosphorylase (PNPase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.734 |
dbpA | ppiB | LLO_3238 | LLO_0332 | Equals llo3238; similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin-type PPIase family); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.798 |
dbpA | rplC | LLO_3238 | LLO_0486 | Equals llo3238; similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.709 |
dbpA | rplX | LLO_3238 | LLO_0497 | Equals llo3238; similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.653 |
dbpA | rpsA | LLO_3238 | LLO_1798 | Equals llo3238; similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.683 |
dbpA | rpsD | LLO_3238 | LLO_0509 | Equals llo3238; similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 30S ribosomal subunit protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.723 |
dbpA | rpsE | LLO_3238 | LLO_0503 | Equals llo3238; similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 30S ribosomal subunit protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.684 |
dbpA | rpsK | LLO_3238 | LLO_0508 | Equals llo3238; similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.661 |
dbpA | yjeF | LLO_3238 | LLO_0352 | Equals llo3238; similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Putative carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...] | 0.777 |
hrpB | dbpA | LLO_0029 | LLO_3238 | Helicase; Equals llo0029. | Equals llo3238; similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.722 |
hrpB | ppiB | LLO_0029 | LLO_0332 | Helicase; Equals llo0029. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin-type PPIase family); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.894 |
hrpB | rpsA | LLO_0029 | LLO_1798 | Helicase; Equals llo0029. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.939 |
hrpB | rpsD | LLO_0029 | LLO_0509 | Helicase; Equals llo0029. | 30S ribosomal subunit protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.937 |
hrpB | rpsE | LLO_0029 | LLO_0503 | Helicase; Equals llo0029. | 30S ribosomal subunit protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.857 |
hrpB | rpsK | LLO_0029 | LLO_0508 | Helicase; Equals llo0029. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.901 |
pnp | dbpA | LLO_0297 | LLO_3238 | Polynucleotide phosphorylase (PNPase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Equals llo3238; similar to ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.734 |
pnp | rplC | LLO_0297 | LLO_0486 | Polynucleotide phosphorylase (PNPase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.817 |
pnp | rpsA | LLO_0297 | LLO_1798 | Polynucleotide phosphorylase (PNPase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.741 |
pnp | rpsD | LLO_0297 | LLO_0509 | Polynucleotide phosphorylase (PNPase); Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 30S ribosomal subunit protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.812 |