STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE86235.1ABC transporter ATP-binding protein. (153 aa)    
Predicted Functional Partners:
AIE87532.1
Macrolide export ATP-binding/permease protein MacB.
 
 0.985
AIE85399.1
Macrolide export ATP-binding/permease protein MacB.
 
 0.984
AIE87837.1
Antimicrobial peptide ABC transporter permease.
 
 
 0.884
AIE86234.1
Hypothetical protein.
 
  
 0.830
AIE85876.1
Heme exporter protein CcmA.
  
    0.767
AIE85527.1
ABC transporter for cobalamin/Fe3+-siderophores ATP-binding protein.
 
   0.725
AIE86610.1
ABC-type multidrug transport system, ATPase component.
 
   
 0.696
AIE85190.1
ABC transporter, ATP-binding protein.
 
 
 0.650
AIE85679.1
ABC transporter, ATP-binding protein NosF.
 
   
 0.650
AIE86260.1
Hypothetical protein.
  
 
 0.648
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
Server load: low (28%) [HD]