STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE86476.1Putative lipoprotein. (202 aa)    
Predicted Functional Partners:
AIE83856.1
Quinol-cytochrome c reductase, fused cytochrome b/c subunit.
  
 
 0.991
AIE85549.1
Fe-S-cluster-containing hydrogenase components 1-like protein.
  
 
 0.962
AIE86464.1
TonB-dependent receptor.
  
     0.713
AIE85558.1
Cytochrome C oxidase subunit III.
  
 
 0.610
AIE86475.1
Hypothetical protein.
       0.590
AIE85685.1
Glucose-methanol-choline oxidoreductase.
 
 
 0.580
AIE84464.1
Oxidoreductase.
  
 
 0.575
AIE86582.1
Rieske (2Fe-2S) domain-containing protein.
  
 
 0.568
AIE86260.1
Hypothetical protein.
  
     0.553
AIE86477.1
Sugar ABC transporter permease.
       0.484
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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