Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRES_1278 | betT | CRES_1278 | CRES_1280 | Transcriptional accessory protein. | Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.434 |
CRES_1278 | gbsA | CRES_1278 | CRES_1279 | Transcriptional accessory protein. | NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | 0.520 |
betA | betT | CRES_1281 | CRES_1280 | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.580 |
betA | gbsA | CRES_1281 | CRES_1279 | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | 0.962 |
betT | CRES_1278 | CRES_1280 | CRES_1278 | Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | Transcriptional accessory protein. | 0.434 |
betT | betA | CRES_1280 | CRES_1281 | Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | 0.580 |
betT | gbsA | CRES_1280 | CRES_1279 | Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | 0.654 |
gbsA | CRES_1278 | CRES_1279 | CRES_1278 | NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Transcriptional accessory protein. | 0.520 |
gbsA | betA | CRES_1279 | CRES_1281 | NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | 0.962 |
gbsA | betT | CRES_1279 | CRES_1280 | NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. | Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.654 |