STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU26837.1Flavodoxin; KEGG: cac:CA_C2026 flavodoxin. (184 aa)    
Predicted Functional Partners:
ADU26838.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cbe:Cbei_3473 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.826
ADU26839.1
Flavodoxin; KEGG: hor:Hore_03990 flavodoxin.
       0.773
ADU26840.1
KEGG: ckr:CKR_2294 hypothetical protein.
       0.768
ADU28225.1
KEGG: cpy:Cphy_3558 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein.
     
 0.677
ADU26841.1
Regulatory protein TetR; KEGG: cbi:CLJ_B1068 transcriptional regulator, TetR family; manually curated; PFAM: regulatory protein TetR.
  
    0.537
ADU26836.1
PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: cth:Cthe_0368 NCAIR mutase (PurE)-related protein.
       0.495
ADU26834.1
Cobalt ABC transporter, inner membrane subunit CbiQ; KEGG: tte:TTE0247 ABC-type cobalt transport system, permease component CbiQ and related transporters; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein.
       0.486
ADU26835.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: mta:Moth_1863 cobalt transport protein CbiM.
       0.477
ADU26833.1
ABC transporter related protein; KEGG: rci:RRC174 putative ABC-type cobalt import system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.474
ADU25853.1
KEGG: cbe:Cbei_0250 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; SagB-type dehydrogenase domain; PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase; KR domain protein; phosphopantetheine-binding; condensation domain protein; Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.466
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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