STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU27461.1KEGG: tdn:Suden_0274 4Fe-4S ferredoxin, iron-sulfur binding. (237 aa)    
Predicted Functional Partners:
ADU27462.1
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: aeh:Mlg_0785 2-hydroxyglutaryl-CoA dehydratase, D-component.
 
    0.842
ADU27463.1
TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: dat:HRM2_43020 HgdC1; PFAM: ATPase BadF/BadG/BcrA/BcrD type.
 
     0.842
ADU27460.1
KEGG: tml:GSTUM_00003874001 hypothetical protein.
       0.773
ADU27459.1
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dak:DaAHT2_0846 2-hydroxyglutaryl-CoA dehydratase D-component.
 
    0.718
ADU27722.1
KEGG: amt:Amet_3611 hypothetical protein.
  
 
 0.550
ADU28225.1
KEGG: cpy:Cphy_3558 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein.
  
  
 0.513
ADU27458.1
Transcriptional regulator, Crp/Fnr family; KEGG: ctc:CTC00896 transcriptional regulatory protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp.
  
  
 0.504
ADU27814.1
KEGG: clj:CLJU_c09100 anaerobic-type carbon monoxide dehydrogenase electron transfer subunit.
  
  
 0.435
ADU26724.1
TIGRFAM: dihydroorotate dehydrogenase family protein; KEGG: ckr:CKR_2115 dihydropyrimidine dehydrogenase; PFAM: dihydroorotate oxidase.
  
 
 0.428
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.