STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746085_00755Unannotated protein. (306 aa)    
Predicted Functional Partners:
GCA_000746085_00754
Unannotated protein.
 
 0.999
GCA_000746085_00753
Unannotated protein.
 
 
 0.997
GCA_000746085_00756
Unannotated protein.
 
 
0.991
GCA_000746085_00758
Unannotated protein.
 
 
 0.991
GCA_000746085_00336
Unannotated protein.
  
 
 
0.905
GCA_000746085_03281
Unannotated protein.
  
 
 
0.905
GCA_000746085_00757
Unannotated protein.
 
     0.895
GCA_000746085_03263
Unannotated protein.
  
 
 0.874
GCA_000746085_00100
Unannotated protein.
  
 
 0.860
GCA_000746085_02363
Unannotated protein.
     
 0.838
Your Current Organism:
Methylocapsa aurea
NCBI taxonomy Id: 663610
Other names: DSM 22158, M. aurea, Methylocapsa aurea Dunfield et al. 2010, Methylocapsa sp. KYG, VKM B-2544, strain KYG
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.