STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMO98306.1Transcriptional regulatory protein AfsQ1; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)    
Predicted Functional Partners:
KMO98307.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.977
KMO96592.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.968
KMO95862.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.905
KMO98308.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.869
KMO98420.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.860
KMO98614.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.859
KMO96477.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.856
KMO99400.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.853
KMO93937.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.853
KMO98393.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.848
Your Current Organism:
Streptomyces roseus
NCBI taxonomy Id: 66430
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