STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yegOMultidrug resistance protein (Multidrug transporter), RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family, TC 2.A.6.2.14 Hypothetical protein yegO; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily. (1024 aa)    
Predicted Functional Partners:
yegM
Multidrug resistance protein precursor, HlyD family secretion protein, TC 8.A.1.6.2 Multidrug resistance protein mdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.997
mdtA
Putative multidrug efflux system inner membrane protein; The Membrane Fusion Protein (MFP) Family, TC 8.A.1.6.2 Multidrug resistance protein mdtA.
 
 0.965
yegN
Multidrug resistance protein (Multidrug transporter), TC 2.A.6.2.12 Hypothetical protein yegN; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily.
 
   
0.917
mdtC
Cation/multidrug efflux pump mdtC; Multidrug resistance protein mdtC (Multidrug transporter mdtC), The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family, TC 2.A.6.2.14 Hypothetical protein yegO; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
 
0.903
acrA
HlyD family secretion protein, efflux transporter, RND family, MFP subunit, TC 8.A.1.6.1 Acriflavine resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.803
baeS
Putative two-component system sensor kinase; Signal transduction histidine-protein kinase baeS, Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, cztS_silS_copS: heavy metal sensor kinase.
  
  
 0.768
nodT
Outer membrane efflux protein.
 
 
 0.648
baeR
Probable transcriptional regulator ycf27 (OmpR-like protein), CheY-like, Response regulator receiver domain, PhoB: phosphate regulon transcriptional regulatory protein PhoB.
  
  
 0.602
tolC
Type I secretion outer membrane protein, TolC, Outer membrane efflux protein, TC 1.B.17.1.1 Outer membrane protein TolC precursor.
  
 
 0.555
EAMY_1281
RND efflux system transporter, outer membrane factor (OMF) lipoprotein, NodT family, TC 3.A.1.105.4 Outer membrane channel protein, TC 1.B.17.3.8 Nodulation protein (Outer membrane efflux protein), TC 2.A.6.2.23 Outer membrane protein.
 
 0.476
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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