STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAMY_3025Putative type VI secretion system, core protein: Uncharacterized protein conserved in bacteria DotU/IcmH-related TC 9.A.34.1.1, uncharacterized protein conserved in bacteria (DUF2077), hypothetical OmpA family protein. (413 aa)    
Predicted Functional Partners:
EAMY_3023
Putative type VI secretion system-associated hypothetical protein COG3913: Uncharacterized protein conserved in bacteria.
 
  
 0.994
EAMY_3024
Putative type VI secretion system, core protein COG3523: Uncharacterized protein conserved in bacteria Protein of unknown function DUF1215 ImcF-related TC 9.A.34.1.1 IcmF-related protein (IcmF-like protein).
 
 
 0.988
EAMY_3027
COG3521: Uncharacterized protein conserved in bacteria.
 
  
 0.987
EAMY_3020
Putative type VI secretion system, core protein COG3517: Uncharacterized protein conserved in bacteria Protein of unknown function DUF877.
 
  
 0.986
EAMY_3022
Putative type VI secretion system, core protein COG3515: Uncharacterized protein conserved in bacteria ImpA-related N-terminal domain.
 
  
 0.984
EAMY_3021
Putative type VI secretion system, core protein COG3516: Uncharacterized protein conserved in bacteria Protein of unknown function (DUF770).
 
  
 0.983
EAMY_3026
Putative type VI secretion system, core protein COG3522: Uncharacterized protein conserved in bacteria Bacterial protein of unknown function (DUF876).
 
  
 0.980
EAMY_3009
Putative type VI secretion system-associated hypothetical protein COG4455: Protein of avirulence locus involved in temperature-dependent protein secretion ImpE protein.
 
  
 0.968
EAMY_3008
Putative type VI secretion system, core protein COG3518: Uncharacterized protein conserved in bacteria Protein of unknown function DUF1316 GPW/gp25 family protein.
 
  
 0.966
EAMY_3007
Putative type VI secretion system, core protein COG3519: Uncharacterized protein conserved in bacteria Bacterial protein of unknown function (DUF879).
 
  
 0.965
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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