STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL53363.1Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
KPL53365.1
Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
    0.980
KPL53364.1
Nitric oxide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.956
KPL53361.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.899
KPL53359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.863
KPL53360.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.824
KPL55103.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.728
KPL55101.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.691
KPL53362.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
KPL53369.1
Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.499
ABB55_28520
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.469
Your Current Organism:
Prosthecomicrobium hirschii
NCBI taxonomy Id: 665126
Other names: ATCC 27832, P. hirschii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.