STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII85702.15-oxoprolinase (ATP-hydrolyzing). (1199 aa)    
Predicted Functional Partners:
AII85633.1
Putative gamma-glutamyltransferase ywrD.
    
 0.910
AII87632.1
Putative cation transport protein ChaC.
     
 0.903
AII86119.1
Glutamate--cysteine ligase.
     
  0.900
gluD
Glutamate dehydrogenase GluD.
    
 0.844
putA
Bifunctional protein PutA; Including proline dehydrogenase and delta-1-pyrroline-5-carboxylate dehydrogenase.
    
  0.838
gltB
Glutamate synthase [NADPH] large chain GltB.
    
 0.831
purQ
Phosphoribosylformylglycinamidine synthase PurQ.
    
  0.803
gltD
Glutamate synthase [NADPH] small chain GltD.
    
  0.801
glnA1
Glutamine synthase GlnA type I.
     
  0.800
glnA2
Glutamine synthase GlnA type I.
     
  0.800
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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