STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coxS2Carbon monoxide dehydrogenase small chain CoxS; OMP type CO DH. (164 aa)    
Predicted Functional Partners:
coxL2
Carbon monoxide dehydrogenase large chain CoxL; OMP type CO DH.
 0.998
coxM2
Carbon monoxide dehydrogenase medium chain CoxM; OMP type CO DH.
 0.997
AII86535.1
Molybdenum-containing hydroxylase.
 0.994
AII86755.1
Dehydrogenase molybdenum-binding subunit.
 0.994
coxL1
Carbon monoxide dehydrogenase large chain CoxL; BMS type CO DH.
 0.993
xdhB
Xanthine dehydrogenase XdhB.
 
     0.953
AII86684.1
Hypothetical protein.
 
  
 0.893
coxF
Carbon monoxide dehydrogenase accessory protein CoxF.
 
  
 0.888
AII86754.1
Dehydrogenase FAD-binding subunit.
 0.868
coxI
Carbon monoxide dehydrogenase accessory protein CoxI.
 
  
 0.848
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.