STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpD3Aerobic glycerol-3-phosphate dehydrogenase GlpD. (567 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase GlpK.
 0.998
gpsA
Glycerol-3-phosphate dehydrogenase GpsA.
  
 0.992
plsB
Glycerol-3-phosphate acyltransferase PlsB.
    
 0.967
AII86153.1
Putative acyltransferase.
  
 
 0.928
plsY
Glycerol-3-phosphate acyltransferase PlsY.
    
 0.915
aqpZ
Aquaporin AqpZ.
  
  
 0.901
AII87796.1
HTH-type transcriptional regulator, DeoR family.
 
  
 0.842
AII87699.1
Diacylglycerol kinase.
    
  0.804
dld
D-lactate dehydrogenase Dld.
 
 
 0.719
AII86828.1
Putative phosphate acyltransferase.
  
 
 0.657
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.