STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0271NatA-like ABC-type transport protein, ATPase component. (264 aa)    
Predicted Functional Partners:
ASAC_0270
ABC transporter, permease protein.
 
  
 0.907
ASAC_0726
Hypothetical protein.
  
 
 0.777
ASAC_0705
ABC transporter, ATP binding protein.
 
0.681
ASAC_0870
ABC transporter, permease protein.
  
 0.649
ASAC_0475
ABC-type multidrug transport system ATPase and permease components-like protein.
  
 0.644
ASAC_1374
ABC-2 type transporter.
 
  
 0.553
ASAC_0535
ABC-type multidrug transport system, permease component.
  
  
 0.487
ASAC_1413
ATP-binding protein involved in mithramycin resistance.
  
  
 0.465
ASAC_1236
Dipeptide/oligopeptide ABC transporter, ATPase component.
    
0.458
rpl2
50S ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
 
 
   0.418
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.