STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0731Third ORF in transposon ISC1913. (412 aa)    
Predicted Functional Partners:
ASAC_0732
First ORF in transposon ISC1913.
 
  
 0.914
ASAC_1417
Hypothetical protein.
  
     0.683
ASAC_0062
Dipeptide/oligopeptide ABC transporter, dipeptide/oligopeptide binding protein.
  
     0.678
ASAC_1331
Amino acid transporter related protein.
 
     0.593
ASAC_1020
Selenocysteine-specific translation elongation factor-like protein.
  
     0.577
ASAC_0987
Serine protease, subtilase family, putative.
  
     0.563
ASAC_0733
Hypothetical protein.
       0.555
ASAC_0882
Terminal quinol oxidase, subunit, putative.
  
     0.543
ASAC_0737
Protease related protein.
 
     0.527
ASAC_0734
Putative endo-beta 1,4-mannanase.
 
     0.523
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.