STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E9G1E1_DAPPUCP-type G domain-containing protein. (710 aa)    
Predicted Functional Partners:
E9G7D6_DAPPU
G domain-containing protein.
  
 
 0.918
E9FYB2_DAPPU
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.915
E9GES7_DAPPU
Uncharacterized protein.
   
 
 0.913
EOG090X02QX
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.898
E9H826_DAPPU
Uncharacterized protein.
   
 0.881
E9GZX3_DAPPU
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 0.873
E9G589_DAPPU
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.868
E9FVZ4_DAPPU
Uncharacterized protein.
   
 
 0.846
E9G682_DAPPU
RRM domain-containing protein.
   
 
 0.831
E9H6Q8_DAPPU
Uncharacterized protein.
   
 
 0.823
Your Current Organism:
Daphnia pulex
NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea
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