STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E9FVZ1_DAPPURRM domain-containing protein. (222 aa)    
Predicted Functional Partners:
E9GI20_DAPPU
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.955
E9GIT7_DAPPU
Uncharacterized protein.
   
 
  0.947
E9GDR8_DAPPU
Uncharacterized protein.
   
 
  0.945
EOG090X0HU3
EOG090X0HU3.
   
 0.923
E9FR65_DAPPU
RRM domain-containing protein.
   
0.916
E9H8S8_DAPPU
RRM domain-containing protein.
   
0.916
E9G1S1_DAPPU
Uncharacterized protein.
    
 0.908
TSU
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.902
EOG090X0F73
EOG090X0F73.
   
 0.895
E9G5P7_DAPPU
Uncharacterized protein.
   
 0.893
Your Current Organism:
Daphnia pulex
NCBI taxonomy Id: 6669
Other names: D. pulex, common water flea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.