STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0750Oxidoreductase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. (335 aa)    
Predicted Functional Partners:
ABC2439
Nucleoside-diphosphate-sugar epimerase.
 
 
 0.725
ABC2908
NADH-dependent butanol dehydrogenase.
  
  
 0.635
ABC3788
NADH-dependent flavin oxidoreductase.
  
    0.579
ABC1303
Cell-division inhibitor.
   
    0.569
ABC3824
Conserved hypothetical protein.
   
    0.569
ABC0749
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.565
ABC2101
Conserved hypothetical protein.
   
    0.565
ABC3530
Hypothetical protein.
   
    0.562
ABC3305
GNAT family acetyltransferase.
  
    0.558
ABC3477
2,5-didehydrogluconate reductase.
 
  
 0.557
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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