STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1015Conserved hypothetical protein. (503 aa)    
Predicted Functional Partners:
ABC1013
Conserved hypothetical protein.
 
  
 0.959
ABC0467
Conserved hypothetical protein.
 
  
 0.853
ABC3606
Conserved hypothetical protein.
 
  
 0.853
ABC0219
Conserved hypothetical protein.
 
  
 0.850
ABC1014
Conserved hypothetical protein.
 
     0.850
ABC3012
Conserved hypothetical protein.
 
  
 0.850
ABC0626
Conserved hypothetical protein.
 
  
 0.694
citS
Two-component sensor histidine kinase.
 
     0.647
citT
Two-component response regulator.
 
     0.643
ABC1016
Suppressor of ChpA inhibitory function.
       0.417
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.