STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1425Major facilitator (MFS) superfamily multidrug resistance protein. (419 aa)    
Predicted Functional Partners:
ABC4002
Major facilitator (MFS) superfamily macrolide-efflux protein.
 
    0.766
ABC1001
Major facilitator (MFS) superfamily protein.
 
    0.719
ABC1424
Conserved hypothetical protein.
  
  
 0.598
ABC0257
Major facilitator (MFS) superfamily macrolide-efflux protein.
 
    0.595
ABC3332
Major facilitator (MFS) superfamily macrolide-efflux protein.
 
    0.594
ABC1423
TetR family transcriptional regulator.
 
     0.560
ABC0392
Hypothetical protein.
  
     0.517
ABC0956
Major facilitator (MFS) superfamily protein.
  
     0.499
ABC2511
Spore coat protein.
  
     0.472
ABC2073
Conserved hypothetical protein.
  
     0.459
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.