STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2380Conserved hypothetical protein. (92 aa)    
Predicted Functional Partners:
ABC2381
Conserved hypothetical protein; Belongs to the UPF0342 family.
 
    0.871
ABC2948
Conserved hypothetical protein.
  
   
 0.711
ABC2378
N6-adenine-specific DNA methylase.
  
  
 0.706
ABC2780
Phosphotransferase.
  
     0.623
ABC3376
Conserved hypothetical protein.
  
     0.608
ABC2396
Conserved hypothetical protein; Belongs to the UPF0358 family.
 
     0.597
ABC2406
Conserved hypothetical protein; Belongs to the UPF0223 family.
 
     0.593
ABC2424
Conserved hypothetical protein; Belongs to the UPF0356 family.
  
   
 0.568
ABC1845
Conserved hypothetical protein.
  
     0.547
ABC2345
Conserved hypothetical protein.
  
     0.536
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.