STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC2386Conserved hypothetical protein. (381 aa)    
Predicted Functional Partners:
ABC2387
Conserved hypothetical protein.
       0.673
ABC2383
Conserved hypothetical protein.
 
     0.618
ABC2384
Conserved hypothetical protein.
 
     0.577
ABC1291
Conserved hypothetical protein.
  
     0.528
ABC0236
Esterase.
  
  
 0.508
ABC2492
Conserved hypothetical protein.
      
 0.496
ABC2698
Conserved hypothetical protein.
  
     0.489
ABC2676
DNA-directed DNA polymerase beta chain.
  
    0.449
ABC2943
Conserved hypothetical protein.
  
     0.437
ABC2381
Conserved hypothetical protein; Belongs to the UPF0342 family.
 
     0.425
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.