STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC4011Lipoprotein. (329 aa)    
Predicted Functional Partners:
ABC4009
Two-component sensor histidine kinase.
 
     0.839
ABC4008
Conserved hypothetical protein.
     
 0.787
ABC4010
Two-component response regulator.
       0.786
cccB
Cytochrome c551.
  
 
 0.644
ABC1691
Cytochrome c551.
  
 
 0.644
ABC4007
Conserved hypothetical protein.
       0.532
ABC2264
Hypothetical protein.
  
   0.492
ABC1051
Conserved hypothetical protein.
  
    0.476
ABC1063
Hypothetical protein.
  
    0.476
ABC4012
Conserved hypothetical protein.
       0.432
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.