ABC4045 protein (Bacillus clausii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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filled nodes:
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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ABC4045

TRAP-type transport system permease small protein. (159 aa)

Predicted Functional Partners:

ABC4046

0.956

ABC4044

0.940

ABC0300

0.748

ABC0608

0.743

ABC1125

0.741

ABC4079

0.740

ABC1124

0.735

ABC0301

0.731

ABC0439

0.731

ABC0440

0.731

Your Current Organism:

Bacillus clausii

NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ABC0300	ABC0301	C4-dicarboxylate transport system permease small protein.	C4-dicarboxylate transport system substrate-binding protein.	0.958
ABC0300	ABC0439	C4-dicarboxylate transport system permease small protein.	C4-dicarboxylate transport system substrate-binding protein.	0.809
ABC0300	ABC0608	C4-dicarboxylate transport system permease small protein.	C4-dicarboxylate transport system substrate-binding protein; Probable gene remnant. Similar to the C-terminal region of Kineococcus radiotolerans SRS30216 predicted dehydrogenases and related proteins Krad06003810 (362 aa); locus_tag:ABC0606.	0.823
ABC0300	ABC1124	C4-dicarboxylate transport system permease small protein.	C4-dicarboxylate transport system substrate-binding protein.	0.813
ABC0300	ABC4044	C4-dicarboxylate transport system permease small protein.	TRAP-type transport system permease large protein.	0.824
ABC0300	ABC4045	C4-dicarboxylate transport system permease small protein.	TRAP-type transport system permease small protein.	0.748
ABC0300	ABC4046	C4-dicarboxylate transport system permease small protein.	TRAP-type transport system substrate-binding protein.	0.796
ABC0300	ABC4079	C4-dicarboxylate transport system permease small protein.	C4-dicarboxylate transport system substrate-binding protein.	0.813
ABC0301	ABC0300	C4-dicarboxylate transport system substrate-binding protein.	C4-dicarboxylate transport system permease small protein.	0.958
ABC0301	ABC0440	C4-dicarboxylate transport system substrate-binding protein.	C4-dicarboxylate transport system permease small protein.	0.808
ABC0301	ABC1125	C4-dicarboxylate transport system substrate-binding protein.	C4-dicarboxylate transport system permease small protein.	0.817
ABC0301	ABC4044	C4-dicarboxylate transport system substrate-binding protein.	TRAP-type transport system permease large protein.	0.803
ABC0301	ABC4045	C4-dicarboxylate transport system substrate-binding protein.	TRAP-type transport system permease small protein.	0.731
ABC0439	ABC0300	C4-dicarboxylate transport system substrate-binding protein.	C4-dicarboxylate transport system permease small protein.	0.809
ABC0439	ABC0440	C4-dicarboxylate transport system substrate-binding protein.	C4-dicarboxylate transport system permease small protein.	0.912
ABC0439	ABC1125	C4-dicarboxylate transport system substrate-binding protein.	C4-dicarboxylate transport system permease small protein.	0.818
ABC0439	ABC4044	C4-dicarboxylate transport system substrate-binding protein.	TRAP-type transport system permease large protein.	0.796
ABC0439	ABC4045	C4-dicarboxylate transport system substrate-binding protein.	TRAP-type transport system permease small protein.	0.731
ABC0440	ABC0301	C4-dicarboxylate transport system permease small protein.	C4-dicarboxylate transport system substrate-binding protein.	0.808
ABC0440	ABC0439	C4-dicarboxylate transport system permease small protein.	C4-dicarboxylate transport system substrate-binding protein.	0.912