STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_13601Protein kinase domain-containing protein. (63 aa)    
Predicted Functional Partners:
SARC_05471
Uncharacterized protein; Belongs to the cyclin family.
    
 0.962
SARC_09120
Uncharacterized protein; Belongs to the cyclin family.
    
 0.907
SARC_06365
Uncharacterized protein.
    
 0.900
SARC_16715
RNA_pol_Rpb1_1 domain-containing protein.
   
 0.875
SARC_00490
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.875
SARC_17868
Protein kinase domain-containing protein.
  
 
 0.811
SARC_13098
UAS domain-containing protein.
   
 0.780
SARC_02421
Diphthami_syn_2 domain-containing protein.
   
 0.761
SARC_14567
Protein kinase domain-containing protein.
    
 0.756
SARC_17573
FCP1 homology domain-containing protein.
   
 0.749
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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