STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_13186MPN domain-containing protein. (177 aa)    
Predicted Functional Partners:
SARC_13098
UAS domain-containing protein.
   
 0.999
SARC_10601
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
  
 0.995
SARC_08622
26S proteasome non-ATPase regulatory subunit 14.
   
 0.995
SARC_00552
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
 0.995
SARC_04252
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
   
 0.994
SARC_11708
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.992
SARC_10960
Proteasome subunit alpha type.
   
 0.992
SARC_07815
PCI domain-containing protein.
   
 0.992
SARC_17109
Uncharacterized protein.
   
 0.991
SARC_01567
Proteasome endopeptidase complex.
   
 0.991
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.