STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_12846AMP-binding domain-containing protein. (679 aa)    
Predicted Functional Partners:
SARC_12977
Uncharacterized protein.
  
 0.776
SARC_01766
PKS_AT domain-containing protein.
   
 0.704
SARC_11745
Abhydro_lipase domain-containing protein.
    
 0.698
SARC_16537
Uncharacterized protein.
     
 0.672
SARC_04279
Palmitoyl-protein thioesterase 1.
     
 0.671
SARC_04797
Uncharacterized protein.
    
 0.667
SARC_09153
Uncharacterized protein.
    
0.652
SARC_02801
Uncharacterized protein.
     
 0.650
SARC_10247
Uncharacterized protein.
    
  0.648
SARC_06571
Uncharacterized protein.
   
 
 0.648
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.