STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_11526Dihydropyrimidinase. (432 aa)    
Predicted Functional Partners:
SARC_08699
Protein URA1.
  
 0.977
SARC_03869
Uncharacterized protein.
  
 0.977
SARC_15410
DHO_dh domain-containing protein.
 
 0.963
SARC_11184
Uncharacterized protein.
  
 
 0.958
SARC_08032
Uncharacterized protein.
  
 
 0.958
SARC_13687
Beta-ureidopropionase.
 
 0.955
SARC_15664
Uncharacterized protein.
  
 0.941
SARC_06824
Uncharacterized protein.
  
 0.941
SARC_04295
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.940
SARC_12456
OMPdecase domain-containing protein.
  
 
 0.937
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.