STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_10306Uncharacterized protein. (619 aa)    
Predicted Functional Partners:
SARC_03691
CUE domain-containing protein.
   
 0.955
SARC_02426
ANK_REP_REGION domain-containing protein.
   
 0.834
SARC_06916
Methyl-accepting transducer domain-containing protein.
    
 0.804
SARC_01647
Tubulin domain-containing protein.
    
 0.750
SARC_18161
WW domain-containing protein.
    
 0.725
SARC_03769
BRCT domain-containing protein.
   
 0.711
SARC_02285
ANK_REP_REGION domain-containing protein.
   
 0.699
SARC_03014
ANK_REP_REGION domain-containing protein.
   
 0.688
SARC_13436
Serine/threonine protein kinase.
    
  0.685
SARC_10792
TK protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.685
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.