STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_017044ABC transporter domain-containing protein. (217 aa)    
Predicted Functional Partners:
C7M84_019777
ATP-binding cassette sub-family D member 2.
  
0.969
C7M84_025265
Putative ATP-binding cassette sub-family D member 4.
  
  
 
0.904
C7M84_009429
Uncharacterized protein.
    
 0.855
C7M84_010613
Peroxisomal membrane protein PEX16.
     
 0.750
C7M84_023113
Peroxisomal membrane protein PMP34; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.720
C7M84_004434
Peroxisomal membrane protein 11B.
   
 
 0.719
C7M84_008662
Putative peroxisome biogenesis factor 13.
   
 
 0.714
C7M84_005854
Uncharacterized protein.
   
 0.710
C7M84_018540
Putative non-specific lipid-transfer protein.
   
 
 0.650
C7M84_018538
Non-specific lipid-transfer protein-like.
   
 
 0.650
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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