STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_0130344-hydroxyphenylpyruvate dioxygenase. (290 aa)    
Predicted Functional Partners:
C7M84_010897
Aspartate aminotransferase.
  
 
 0.970
C7M84_023507
Aspartate aminotransferase.
  
 
 0.970
C7M84_013980
Homogentisate 1,2-dioxygenase.
  
 0.967
C7M84_002465
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
   
 
 0.842
C7M84_024637
Putative 4-hydroxybenzoate polyprenyltransferase, mitochondrial.
     
 0.781
C7M84_004686
Fumarylacetoacetase.
 
  
 0.778
C7M84_006250
Propionyl-CoA carboxylase alpha chain, mitochondrial.
  
 
 0.763
C7M84_019617
Methylcrotonoyl-CoA carboxylase.
  
 
 0.763
C7M84_013639
Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like.
  
 
 0.737
C7M84_007973
Carboxyl transferase domain protein.
  
 
 0.737
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.