STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_010245Uncharacterized protein; Belongs to the actin family. (287 aa)    
Predicted Functional Partners:
C7M84_005836
Uncharacterized protein.
     
 0.675
C7M84_024486
Histone H2A deubiquitinase MYSM1.
    
 0.586
C7M84_015891
Actin T2.
  
     0.526
C7M84_003042
Beta-actin.
  
     0.525
C7M84_015883
Actin T2.
  
     0.524
C7M84_003047
Actin T2.
  
     0.520
C7M84_012605
Actin 2; Belongs to the actin family.
  
     0.472
C7M84_015882
Skeletal muscle actin 6; Belongs to the actin family.
  
     0.469
C7M84_012589
Actin 1; Belongs to the actin family.
  
     0.467
C7M84_015874
Actin 2; Belongs to the actin family.
  
     0.467
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.