STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_022552Putative fork head transcription factor 1. (595 aa)    
Predicted Functional Partners:
C7M84_018959
Twist.
   
  
 0.571
C7M84_010780
Threonine/serine protein kinase.
    
 0.571
C7M84_005872
Endothelial transcription factor GATA-2.
    
 0.558
C7M84_022072
Uncharacterized protein.
    
 0.521
C7M84_007551
Putative CREB-binding protein isoform X5.
    
 0.521
C7M84_012868
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.504
C7M84_015329
Putative forkhead box protein L1-like.
  
 
0.452
C7M84_020788
14-3-3 epsilon-like transcript variant 1; Belongs to the 14-3-3 family.
   
 0.449
C7M84_025459
Sox8.
   
 0.449
C7M84_001511
SoxE.
   
 0.449
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.