STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_002740Neural cell expressed, developmentally down-regulated 1. (769 aa)    
Predicted Functional Partners:
C7M84_019174
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.948
C7M84_000458
Gamma-tubulin complex component.
    
 0.933
C7M84_000164
Gamma-tubulin complex component.
    
 0.927
C7M84_007519
Gamma-tubulin complex component.
    
 0.824
C7M84_014017
Putative gamma-tubulin complex component 6.
    
 0.824
C7M84_011511
HAUS-augmin3 domain-containing protein.
   
 0.765
C7M84_013629
Uncharacterized protein.
     
 0.730
C7M84_011518
Gamma-tubulin complex component.
   
 0.719
C7M84_011517
Putative gamma-tubulin complex component 2-like isoform X1.
   
 0.694
C7M84_009927
Nucleoside diphosphate kinase.
    
 0.605
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.